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P450 Enzymes study notes
Functions
- Xenobiotic metabolism (especially lipophilic substances)
- biosynthesis of chemical signalling molecules such as steroids and fatty acid derivatives
- Thromboxane (product of the metabolism of arachidonic acid), vasoconstrictor
- Prostacyclin (product of the metabolism of arachidonic acid), vasodilator
- Detoxification of endogenous molecules such as steroids
- Generation of prostaglandins
- Biosynthesis of complicated defense chemicals
- metabolism of drugs/exogenous toxins (espeically CYP3A4, Cyp1A1, Cyp1A2, Cyp2D6, and the Cyp2C enzymes)
- They add a reactive group, such as hydroxyl radical, to the molecule being processed
- The process requires
- Oxygen
- Misc. cofactors: NADH, riboflavin, niacin, magnesium, iron, certain indoles from cruciferous vegetables
- Danger: if these reactive molecules are not further metabolized by Phase II conjugation, they may cause damage to proteins, RNA, and DNA within the cell.
Distribution
- Liver
- Organs of entry: gut, lung. skin, kidney/bladder
- steroidogenic tissues
- brain & vasculature (expression P450s)
- every tissue
Influences on them
- Ketoconazole fairly non-selective inhibitor of P450s, perturbing mammalian steroid metabolism
- St. John's Wort
- Narginen flavonoid high in grapefruit juice; inhibits first-pass metabolism of many drugs detoxified through the Cyp3A4 enzyme-antiporter system in the intestine (tips of villi).
- Silymarin - has been helping me, inhibits [?]
- Artichoke (related to Silymarin) stimultes bile
- Burdock
- NAC (N-Acetylcysteine) "not everybody tolerates NAC well." Steven Shackel
- Dandelion (I believe I reacted to this when I tried it in '97.)
- Curcumin (the compound that gives turmeric its yellow color) inhibits phase I while stimulating phase II.
- The bioflavonoid quercetin inhibits lipoxygenase (good!) and also sulfotransferase [not so good? look this up]*
Indivdual Enzymes
(For more detail on all these see David Nelson)
Family Cyp1: drug metabolism
- Induced by aromatic hydrocarbons
- Family 1A appears to be involved particularly in dealing with products of combustion
- inducible by polycyclic hydrocarbons, some of which are found in cigarette smoke and charred food.
- they activate compounds to carcinogens
- Cyp1A1
- Cyp1A2
- demethylates caffeine; rate of demethylation can show if a person has been induced by exposure to polycyclic aromatic hydrocarbons
- inhibited by
- Piper methysticum (Kava)
- Hopkins, Ursula K (Pharm.D, Clinical Toxicology Fellow, Maryland Poison Center), Dietary Supplements: Potential Risks in MSHP PHARMASCRIPT May 2000 (Vol.23 No. 5).
- possibly: Valerian and Gingko biloba, chili pepper and black peppers may inhibit CYP 1A2 enzymes (see Hopkins.)
- grapefruit* [check this]
- Cyp1B1
Family Cyp2 (largest family in humans): drug & steroid metabolism
- Cyp2E1
- oxidation of ethyl alcohol to acetaldehyde
- detoxifies many of the small carbon-chain molecules, including ketone bodies, that result from gluconeogenesis and the breakdown of fatty acids.
- energy metabolism
- increased by starvation (see notes to Liska)
Family Cyp3: drug metabolism
- Cyp3A4
- "most abundantly expressed P450 in the liver"
- high concentrations at tip of intestinal villi as well as liver
- one of the P450s responsible for metabolism of drugs/exogenous toxins
- inhibited by
- ketoconazole very strong effect
- progesterone (See notes to Liska)
- Hypericum perforatum (St. John's Wort)
- Moore et al show induction
- However Ohrbach shows inhibition
- Budzinski JW, Foster BC, Vandenhoek S, et al. An in vitro evaluation of human cytochrome P450 3A4 inhibition by selected commercial herbal extracts and tinctures, Phytomedicine 2000;7(4): 273-282. (See abstract at bottom of this page.)
- Hopkins
- Hydrastis () Budzinski et al.
- Piper methysticum (Kava)
- Budzinski et al.
- Hopkins
- Grapefruit
- Hopkins
- See notes to Liska
- antifungals and hydrocortisone*
- Cloves, ginger, oregano, sage, thyme, turmeric, chamomile, echinacea, feverfew, Siberian ginseng, goldenseal, and soybean: Effects of Natural Health Products on Cytochrome P-450 Drug Metabolism. B. C. FOSTER1, S. VANDENHOEK2, J. HANNA2 , M. H. AKHTAR3, and A. KRANTIS2. Health Canada, Ottawa, Ontario1, Digestive Diseases Research Group, University of Ottawa2, Ottawa, Agriculture and Agri-Food Canada3, Guelph, Ontario.
- See Poster # AAFC 050 from the Food Science at Work Conference, University of Guelph, (Ontario, Canada) September 16 & 17, 1999.
- Another report of the same conference on the site of CATIE (Community AIDS Treatment Information Exchange)
- Some substrates:
- Acetaminophen -- mixed function oxidase system, specifically cyp2E1. See Acetaminophen Poisoning.
- Codeine
- Erythromycin
- Lidocaine
Family Cyp4: arachidonic acid or fatty acid metabolism
Faamily Cyp5: Thromboxane A2 synthase
- Inhibitors: ketoconazole, itrconazole, erythromycin
Family Cyp7A: the first and rate-liminting step of bile acid synthesis
Family Cyp7B: brain-specific form of 7-alpha hydroxylase. Catalyzes the synthesis of neurosteroids
Family Cyp8A: prostacyclin synthase
Family Cyp8B: bile acid biosynthesis
Family Cyp11: steroid biosynthesis
Family Cyp17: steroid biosynthesis
Family Cyp19: aromatase that makes estrogen
Family Cyp21: steroid biosynthesis
Family Cyp24: Vitamin D degradation
Family Cyp26: retinoic acid hydroxylase
Family Cyp27A: bile acid biosynthesis
- CYP27A1 in Vitamin D metabolism, catalyzes the conversion of cholecalciferol to 25(OH)D(3) and of 25(OH)D(3) to calcitriol
Family Cyp27B: Vitamin D3 1-alphya hyroxylase activates vitamin D3
Family Cyp46: cholesterol 24-hydroxylase
Family Cyp51: cholesterol biosynthesis, lanosterol 14-alpha demethylase. "the target of the triazle antifungal drugs like ketaconazole." (Nelson)
- *posting on AMALGAM email list (see directions for access)
- My page Detoxification
- My page Progesterone
- Essential P450s - Heme thiolate proteins and their place in the biosphere. A brief but comprehensive introductory survey offered as a tutorial for a Pharmacology course.
- The Detoxification Enzyme Systems by DeAnn J. Liska, PhD. Brief survey of Phases I, II and III, with extensive references.
- Cytochrome P450s in humans, by Dr. David Nelson, University of Tennessee, Memphis moderately detailed descriptions of the P450s whose functions have been identified.
- Cytochrome P450 a brief overview, from MCS - Allergy Help . A somewhat spotty and chaotic site, but it has a search engine.
- Cytochrome P450 Homepage - the website of the Committee for Standardized Cytochrome P450 Nomenclature, maintained by Dr. David Nelson. Updated frequently.
- Cytochrome P450 Drug Interaction Table., by D.A. Flockhart.
- Aromatase Cytochrome P450 and in Situ Estrogen Production - conversion of androgens to estrogens
- Xenobiotic-Metabolizing Enzymes - by Mendelsohn et al, chapter "Xenobiotic-Metabolizing Enzymes in Biomarker Research," Biomarkers and Occupational Health: Progress and Perspectives (1995) Joseph Henry Press / Nat'l Academy Press, p 239. Table of 19 enzymes and their co-substrates.
- P450s and St. John's Wort
- Expert Protein Analysis System database's entry on CYP 3A4
- from MiDobs@INTERNETWIS.COM
- message-ID: <199902281552.SM00141@default>
- Sun, 28 Feb 1999 14:50:18 -0800
copyright © 2000 by Catherine Holmes Clark. Last updated 17 November 2000
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